Thursday, December 8, 2016

A dual origin of domestic dogs

Man's best friend. Dogs were domesticated not once, but
twice in  different parts of the world. Photo Credit:
© lenaivanova2311 / Fotolia
The question, 'Where do domestic dogs come from?', has vexed scholars for a very long time. Some argue that humans first domesticated wolves in Europe, while others claim this happened in Central Asia or China. A new paper, published in Science, suggests that all these claims may be right. Supported by funding from the European Research Council and the Natural Environment Research Council, a large international team of scientists compared genetic data with existing archaeological evidence and show that man's best friend may have emerged independently from two separate (possibly now extinct) wolf populations that lived on opposite sides of the Eurasian continent. This means that dogs may have been domesticated not once, as widely believed, but twice.
A major international research project on dog domestication, led by the University of Oxford, has reconstructed the evolutionary history of dogs by first sequencing the genome (at Trinity College Dublin) of a 4,800-year old medium-sized dog from bone excavated at the Neolithic Passage Tomb of Newgrange, Ireland. The team (including French researchers based in Lyon and at the National Museum of Natural History in Paris) also obtained mitochondrial DNA from 59 ancient dogs living between 14,000 to 3,000 years ago and then compared them with the genetic signatures of more than 2,500 previously studied modern dogs.
The results of their analyses demonstrate a genetic separation between modern dog populations currently living in East Asia and Europe. Curiously, this population split seems to have taken place after the earliest archaeological evidence for dogs in Europe. The new genetic evidence also shows a population turnover in Europe that appears to have mostly replaced the earliest domestic dog population there, which supports the evidence that there was a later arrival of dogs from elsewhere. Lastly, a review of the archaeological record shows that early dogs appear in both the East and West more than 12,000 years ago, but in Central Asia no earlier than 8,000 years ago.
Combined, these new findings suggest that dogs were first domesticated from geographically separated wolf populations on opposite sides of the Eurasian continent. At some point after their domestication, the eastern dogs dispersed with migrating humans into Europe where they mixed with and mostly replaced the earliest European dogs. Most dogs today are a mixture of both Eastern and Western dogs -- one reason why previous genetic studies have been difficult to interpret.
The international project (which is combining ancient and modern genetic data with detailed morphological and archaeological research) is currently analysing thousands of ancient dogs and wolves to test this new perspective, and to establish the timing and location of the origins of our oldest pet.
Senior author and Director of Palaeo-BARN (the Wellcome Trust Palaeogenomics & Bio-Archaeology Research Network) at Oxford University, Professor Greger Larson, said: 'Animal domestication is a rare thing and a lot of evidence is required to overturn the assumption that it happened just once in any species. Our ancient DNA evidence, combined with the archaeological record of early dogs, suggests that we need to reconsider the number of times dogs were domesticated independently. Maybe the reason there hasn't yet been a consensus about where dogs were domesticated is because everyone has been a little bit right.'
Lead author Dr Laurent Frantz, from the Palaeo-BARN, commented: 'Reconstructing the past from modern DNA is a bit like looking into the history books: you never know whether crucial parts have been erased. Ancient DNA, on the other hand, is like a time machine, and allows us to observe the past directly.'
Senior author Professor Dan Bradley, from Trinity College Dublin, commented: 'The Newgrange dog bone had the best preserved ancient DNA we have ever encountered, giving us prehistoric genome of rare high quality. It is not just a postcard from the past, rather a full package special delivery.'
Professor Keith Dobney, co-author and co-director of the dog domestication project from Liverpool University's Department of Archaeology, Classics and Egyptology, is heartened by these first significant results. 'With the generous collaboration of many colleagues from across the world-sharing ideas, key specimens and their own data -- the genetic and archaeological evidence are now beginning to tell a new coherent story. With so much new and exciting data to come, we will finally be able to uncover the true history of man's best friend.'

Citation
L. A. F. Frantz, V. E. Mullin, M. Pionnier-Capitan, O. Lebrasseur, M. Ollivier, A. Perri, A. Linderholm, V. Mattiangeli, M. D. Teasdale, E. A. Dimopoulos, A. Tresset, M. Duffraisse, F. McCormick, L. Bartosiewicz, E. Gal, E. A. Nyerges, M. V. Sablin, S. Brehard, M. Mashkour, A. B l  escu, B. Gillet, S. Hughes, O. Chassaing, C. Hitte, J.-D. Vigne, K. Dobney, C. Hanni, D. G. Bradley, G. Larson. 2016. Genomic and archaeological evidence suggests a dual origin of domestic dogs. Science, 2016; 352 (6290): 1228 DOI: 10.1126/science.aaf3161

Praise or food preference in dogs

Chowhound: Ozzie, a shorthaired terrier mix, was the only dog in the
experiments that chose food over his owner's praise 100 percent
of the time. "Ozzie was a bit of an outlier," Berns says,"but Ozzie's
owner understands him and still loves him." Credit: Gregory Berns
Given the choice, many dogs prefer praise from their owners over food, suggests a new study published in the journal Social, Cognitive and Affective Neuroscience. The study is one of the first to combine brain-imaging data with behavioral experiments to explore canine reward preferences.

"We are trying to understand the basis of the dog-human bond and whether it's mainly about food, or about the relationship itself," says Gregory Berns, a neuroscientist at Emory University and lead author of the research. "Out of the 13 dogs that completed the study, we found that most of them either preferred praise from their owners over food, or they appeared to like both equally. Only two of the dogs were real chow-hounds, showing a strong preference for the food."

Dogs were at the center of the most famous experiments of classical conditioning, conducted by Ivan Pavlov in the early 1900s. Pavlov showed that if dogs are trained to associate a particular stimulus with food, the animals salivate in the mere presence of the stimulus, in anticipation of the food.

"One theory about dogs is that they are primarily Pavlovian machines: They just want food and their owners are simply the means to get it," Berns says. "Another, more current, view of their behavior is that dogs value human contact in and of itself."

Berns heads up the Dog Project in Emory's Department of Psychology, which is researching evolutionary questions surrounding man's best, and oldest friend. The project was the first to train dogs to voluntarily enter a functional magnetic resonance imaging (fMRI) scanner and remain motionless during scanning, without restraint or sedation. In previous research, the Dog Project identified the ventral caudate region of the canine brain as a reward center. It also showed how that region of a dog's brain responds more strongly to the scents of familiar humans than to the scents of other humans, or even to those of familiar dogs.

For the current experiment, the researchers began by training the dogs to associate three different objects with different outcomes. A pink toy truck signaled a food reward; a blue toy knight signaled verbal praise from the owner; and a hairbrush signaled no reward, to serve as a control.

The dogs then were tested on the three objects while in an fMRI machine. Each dog underwent 32 trials for each of the three objects as their neural activity was recorded.

All of the dogs showed a stronger neural activation for the reward stimuli compared to the stimulus that signaled no reward, and their responses covered a broad range. Four of the dogs showed a particularly strong activation for the stimulus that signaled praise from their owners. Nine of the dogs showed similar neural activation for both the praise stimulus and the food stimulus. And two of the dogs consistently showed more activation when shown the stimulus for food.

The dogs then underwent a behavioral experiment. Each dog was familiarized with a room that contained a simple Y-shaped maze constructed from baby gates: One path of the maze led to a bowl of food and the other path to the dog's owner. The owners sat with their backs toward their dogs. The dog was then repeatedly released into the room and allowed to choose one of the paths. If they came to the owner, the owner praised them.

"We found that the caudate response of each dog in the first experiment correlated with their choices in the second experiment," Berns says. "Dogs are individuals and their neurological profiles fit the behavioral choices they make. Most of the dogs alternated between food and owner, but the dogs with the strongest neural response to praise chose to go to their owners 80 to 90 percent of the time. It shows the importance of social reward and praise to dogs. It may be analogous to how we humans feel when someone praises us."

The experiments lay the groundwork for asking more complicated questions about the canine experience of the world. The Berns' lab is currently exploring the ability of dogs to process and understand human language.

"Dogs are hypersocial with humans," Berns says, "and their integration into human ecology makes dogs a unique model for studying cross-species social bonding."

Citation

Peter F. Cook, Ashley Prichard, Mark Spivak, Gregory S. Berns. Awake canine fMRI predicts dogs’ preference for praisevsfood. 2016. Social Cognitive and Affective Neuroscience, 2016; nsw102 DOI: 10.1093/scan/nsw102